Thorium in PDB 4zhc: Siderocalin-Mediated Recognition and Cellular Uptake of Actinides

The structure of Siderocalin-Mediated Recognition and Cellular Uptake of Actinides, PDB code: 4zhc was solved by B.E.Allred, P.B.Rupert, S.S.Gauny, D.D.An, C.Y.Ralston, M.Sturzbecher-Hoehne, R.K.Strong, R.J.Abergel, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	50.00 / 2.04
Space group	P 41 21 2
Cell size a, b, c (Å), α, β, γ (°)	114.657, 114.657, 119.226, 90.00, 90.00, 90.00
R / Rfree (%)	20.6 / 22.9

The binding sites of Thorium atom in the Siderocalin-Mediated Recognition and Cellular Uptake of Actinides (pdb code 4zhc). This binding sites where shown within 5.0 Angstroms radius around Thorium atom.
In total 3 binding sites of Thorium where determined in the Siderocalin-Mediated Recognition and Cellular Uptake of Actinides, PDB code: 4zhc:
Jump to Thorium binding site number: 1; 2; 3;

Thorium binding site 1 out of 3 in the Siderocalin-Mediated Recognition and Cellular Uptake of Actinides


Mono view


Stereo pair view

A full contact list of Thorium with other atoms in the Th binding site number 1 of Siderocalin-Mediated Recognition and Cellular Uptake of Actinides within 5.0Å range: probe atom residue distance (Å) B Occ A:Th201 b:60.6 occ:1.00 O15 A:TC2202 2.4 37.5 1.0 O14 A:TC2202 2.6 38.9 1.0 C3 A:TC2202 3.3 41.7 1.0 C2 A:TC2202 3.4 45.1 1.0 NZ A:LYS125 4.1 49.2 1.0 OH A:TYR106 4.6 37.0 1.0 C4 A:TC2202 4.7 34.4 1.0 NZ A:LYS134 4.7 41.1 1.0 C1 A:TC2202 4.7 40.0 1.0 N9 A:TC2202 4.8 51.0 1.0 O39 A:TC2202 4.9 73.7 1.0 CE2 A:TYR106 5.0 34.8 1.0

Thorium binding site 2 out of 3 in the Siderocalin-Mediated Recognition and Cellular Uptake of Actinides


Mono view


Stereo pair view

A full contact list of Thorium with other atoms in the Th binding site number 2 of Siderocalin-Mediated Recognition and Cellular Uptake of Actinides within 5.0Å range: probe atom residue distance (Å) B Occ B:Th201 b:92.2 occ:1.00 O14 B:TC2202 2.4 60.1 1.0 O15 B:TC2202 3.2 54.2 1.0 C2 B:TC2202 3.5 69.6 1.0 C3 B:TC2202 3.8 66.7 1.0 NZ B:LYS125 3.8 73.5 1.0 N9 B:TC2202 4.7 75.1 1.0 C1 B:TC2202 4.7 74.0 1.0 CE B:LYS125 4.9 68.0 1.0 OH B:TYR106 5.0 55.8 1.0

Thorium binding site 3 out of 3 in the Siderocalin-Mediated Recognition and Cellular Uptake of Actinides


Mono view


Stereo pair view

A full contact list of Thorium with other atoms in the Th binding site number 3 of Siderocalin-Mediated Recognition and Cellular Uptake of Actinides within 5.0Å range: probe atom residue distance (Å) B Occ C:Th201 b:62.7 occ:1.00 O14 C:TC2202 2.6 52.2 1.0 O15 C:TC2202 2.6 35.1 1.0 C2 C:TC2202 3.4 45.5 1.0 C3 C:TC2202 3.4 41.2 1.0 NZ C:LYS134 4.1 37.6 1.0 NZ C:LYS125 4.6 36.5 1.0 OH C:TYR106 4.7 36.1 1.0 C1 C:TC2202 4.8 33.5 1.0 C4 C:TC2202 4.8 32.0 1.0 N9 C:TC2202 4.8 60.9 1.0

B.E.Allred, P.B.Rupert, S.S.Gauny, D.D.An, C.Y.Ralston, M.Sturzbecher-Hoehne, R.K.Strong, R.J.Abergel. Siderocalin-Mediated Recognition, Sensitization, and Cellular Uptake of Actinides. Proc.Natl.Acad.Sci.Usa V. 112 10342 2015.
ISSN: ESSN 1091-6490
PubMed: 26240330
DOI: 10.1073/PNAS.1508902112